Welcome to MetaCortex’s documentation!

The publication is now available at https://academic.oup.com/bioinformatics/article/39/1/btad020/6986127

Contents:

• Introduction
  • Key Concepts
  • Algorithms
  • Sequence Graphs
• Installation
  • Mac OS
• Usage
  • Creating intermediate CTX files
  • Merging CTX files and writing contigs
  • Options
• Tutorial